PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast04G233200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 382aa    MW: 42131.6 Da    PI: 6.6572
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast04G233200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.22.3e-51101421128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgk 88 
                         +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL    ++ ++ + ewyfFs++dkky+tg+r+nrat++g+Wkatg+
  Brast04G233200.1.p  10 VPPGFRFHPTDEELLYYYLRKKVAYEAIDL-DVIREVDLNKLEPWDLIDrcRIGTGPQdEWYFFSHKDKKYPTGTRTNRATAAGFWKATGR 99 
                         69****************************.9***************742455554445******************************** PP

                 NAM  89 dkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         dk++l +   + + +gl+ktLvfy+grap+g+ktdW+mheyrl
  Brast04G233200.1.p 100 DKAILLHgdsNARRIGLRKTLVFYTGRAPHGTKTDWIMHEYRL 142
                         *****987666677***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-596164IPR003441NAC domain
PROSITE profilePS5100558.43210164IPR003441NAC domain
PfamPF023652.1E-2711142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MHPNIAPLTV PPGFRFHPTD EELLYYYLRK KVAYEAIDLD VIREVDLNKL EPWDLIDRCR  60
IGTGPQDEWY FFSHKDKKYP TGTRTNRATA AGFWKATGRD KAILLHGDSN ARRIGLRKTL  120
VFYTGRAPHG TKTDWIMHEY RLDDDNADAP PPEDGWVVCR VFKKKSIQRG YEQPDHMLAG  180
AAELTGQSSS QFHATAGMAL PVEEMDQKHG FHQQLMHIHG GVGGFIPTFD PSMHLPQLTS  240
AETPPAFMSG SSTQAPHVGV NSQLLDDIGF PSQSQNMMKL TTPCSGGEAA GTGEMLLNGG  300
EGVRFGAGAD WSILDKLLES HQNLDQLFHG NGKLGGSAAV LAPTTLQQQQ LRMETGASSL  360
QRLPFFHYLA CDAADLLKFS K*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A9e-51516612167NO APICAL MERISTEM PROTEIN
1ut4_B9e-51516612167NO APICAL MERISTEM PROTEIN
1ut7_A9e-51516612167NO APICAL MERISTEM PROTEIN
1ut7_B9e-51516612167NO APICAL MERISTEM PROTEIN
3swm_A1e-50516615170NAC domain-containing protein 19
3swm_B1e-50516615170NAC domain-containing protein 19
3swm_C1e-50516615170NAC domain-containing protein 19
3swm_D1e-50516615170NAC domain-containing protein 19
3swp_A1e-50516615170NAC domain-containing protein 19
3swp_B1e-50516615170NAC domain-containing protein 19
3swp_C1e-50516615170NAC domain-containing protein 19
3swp_D1e-50516615170NAC domain-containing protein 19
4dul_A9e-51516612167NAC domain-containing protein 19
4dul_B9e-51516612167NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003572085.10.0PREDICTED: NAC domain-containing protein 76-like
RefseqXP_014756126.10.0PREDICTED: NAC domain-containing protein 76-like
SwissprotQ5Z6B61e-104NAC76_ORYSJ; NAC domain-containing protein 76
TrEMBLI1HZ990.0I1HZ99_BRADI; Uncharacterized protein
STRINGBRADI3G09520.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34613781
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.31e-80NAC family protein